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| BGcom-package | Synthesizing List of Differentially Expressed Features |
| baymod | Bayesian model for the ratio of observed to expected probability of genes to be in common |
| BGcom | Synthesizing List of Differentially Expressed Features |
| createTable | Function to create an output table |
| designCount | Internal function |
| designMatrix | Internal function |
| extractGenes | Function for extracting the lists of genes in common |
| ratio | Function for calculating the ratio T between the observed genes in common and the expected one |
| simulation | Simulate the data in form of p-values |
| simulation.indep | Simulation for independent experiments |
| Tmc | Function to calculate the empirical null distribution of max(T) |